Scientific Sense ® by Gill Eapen: Prof Trey Ideker is Professor of Medicine, Bioengineering and Computer Science at the University of California, San Diego. He directs the National Resource for Network Biology, and the Cancer Cell Map and Psychiatric Cell Map Initiatives.
A multi-scale map of cell structure fusing protein images and interactions. Nature. 2021 Nov 24. doi: 10.1038/s41586-021-04115 “We Might Not Know Half of What’s in Our Cells, New AI Technique Reveals Interpretation of cancer mutations using a multiscale map of protein systems. Science. 2021 A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity. A protein interaction landscape of breast cancer. Science. 2021 Oct;374(6563):eabf3066 “Studies Delve Deep into the Protein Machinery of Cancer Cells.” NCI (4 Nov 2021) “From COVID to cancer, gene-mapping tool could ‘revolutionize’ treatment“. SF Chronicle (2 Oc “Moonshot Project Aims to Understand and Beat Cancer Using Protein Maps“. Singularity Hub (5 Oct 2021) “Looking Beyond DNA to See Cancer with New Clarity,” Predicting Drug Response and Synergy Using a Deep Learning Model of Human Cancer Cells. Cancer Cell (2020), https://doi.org/10.1016/j.ccell.2020.09.014. PMID: 33096023. [PDF] [PubMed] Related Press: UCSD Health, AZoLifeSciences, Med India, Health IT Analytics and ScienceDaily. Quantitative Translation of Dog-to-Human Aging by Conserved Remodeling of the DNA Methylome. Cell Systems. 2020 Aug 26;11(2):176-185.e6. doi: 10.1016/j.cels.2020.06.006. Epub 2020 Jul 2. PMID: 32619550 [PDF] [PubMed] *Cover Article Related Press: Here’s a better way to convert dog years to human years, scientists say. Science Magazine (15 Nov 2019). See also: Scientific American, BBC, NPR, Washington Post, Discover Magazine, Smithsonian, New York Post, (and more) Identifying Epistasis in Cancer Genomes: A Delicate Affair. Cell. 2019 May 30;177(6):1375-1383. doi: 10.1016/j.cell.2019.05.005. Review. PMID: 31150618 [PDF] [PubMed] Using deep learning to model the hierarchical structure and function of a cell.* Nat Methods. 2018 Mar 5. doi: 10.1038/nmeth.4627. PMID: 29505029 [PDF] [PubMed] [Cover Art] *Cover article Please subscribe to this channel: https://www.youtube.com/c/ScientificSense?sub_confirmation=1
--- Support this podcast: https://podcasters.spotify.com/pod/show/scientificsense/supportProf. Sheena Josselyn, Professor of Psychology and Physiology at the University of Toronto
Prof. Beatriz Luna, Professor of Psychiatry, Pediatrics and Psychology at the University of Pittsburgh
Prof. Robert Finger, Professor of Agricultural Economics and Policy at the ETH Zurich
Prof. Christine Aidala, Professor of Physics at the University of Michigan.
Prof. Sebnem Kalemli-Ozcan, Professor of Economics at the University of Maryland
Prof. Gregory Tarle, Professor of Experimental Cosmology and Astrophysics at the University of Michigan
Prof. Paul Davies, Professor of Physics and Cosmology at the Arizona State University.
Prof. Arik Levinson, Professor of Economics at Georgetown University.
Prof. Kimberly Gray, Professor of Civil and Environmental Engineering at Northwestern University
Prof. William Fuchs, Professor of Finance at the University of Texas.
Prof. Steve Cundiff, Professor of Physics at the University of Michigan
Prof. Woodward Fischer, Professor of Geobiology at the California Institute of Technology.
Prof. Kiyoshi Masui, Assistant professor of Physics at Massachusetts Institute of Technology
Prof. Omar Ahmed, Assistant Professor of Psychology and Neuroscience at the University of Michigan
Prof. William Renthal, Director of Research at the John Graham Headache Center at Brigham and Women’s Hospital of Harvard
Prof. Hui Deng, Professor of Physics at the University of Michigan.
Prof. Anupam Garg, Professor of Physics and Astronomy at Northwestern University.
Prof. Gilles Hilary, Professor of Accounting at Georgetown University.
Prof. Bill Gibson, Professor of Economics at the University of Vermont.
Prof. Morton Schapiro, President of Northwestern University and Prof. Gary Morson, Professor of the Arts and Humanities at Northwestern
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