Scientific Sense ® by Gill Eapen: Prof Trey Ideker is Professor of Medicine, Bioengineering and Computer Science at the University of California, San Diego. He directs the National Resource for Network Biology, and the Cancer Cell Map and Psychiatric Cell Map Initiatives.
A multi-scale map of cell structure fusing protein images and interactions. Nature. 2021 Nov 24. doi: 10.1038/s41586-021-04115 “We Might Not Know Half of What’s in Our Cells, New AI Technique Reveals Interpretation of cancer mutations using a multiscale map of protein systems. Science. 2021 A protein network map of head and neck cancer reveals PIK3CA mutant drug sensitivity. A protein interaction landscape of breast cancer. Science. 2021 Oct;374(6563):eabf3066 “Studies Delve Deep into the Protein Machinery of Cancer Cells.” NCI (4 Nov 2021) “From COVID to cancer, gene-mapping tool could ‘revolutionize’ treatment“. SF Chronicle (2 Oc “Moonshot Project Aims to Understand and Beat Cancer Using Protein Maps“. Singularity Hub (5 Oct 2021) “Looking Beyond DNA to See Cancer with New Clarity,” Predicting Drug Response and Synergy Using a Deep Learning Model of Human Cancer Cells. Cancer Cell (2020), https://doi.org/10.1016/j.ccell.2020.09.014. PMID: 33096023. [PDF] [PubMed] Related Press: UCSD Health, AZoLifeSciences, Med India, Health IT Analytics and ScienceDaily. Quantitative Translation of Dog-to-Human Aging by Conserved Remodeling of the DNA Methylome. Cell Systems. 2020 Aug 26;11(2):176-185.e6. doi: 10.1016/j.cels.2020.06.006. Epub 2020 Jul 2. PMID: 32619550 [PDF] [PubMed] *Cover Article Related Press: Here’s a better way to convert dog years to human years, scientists say. Science Magazine (15 Nov 2019). See also: Scientific American, BBC, NPR, Washington Post, Discover Magazine, Smithsonian, New York Post, (and more) Identifying Epistasis in Cancer Genomes: A Delicate Affair. Cell. 2019 May 30;177(6):1375-1383. doi: 10.1016/j.cell.2019.05.005. Review. PMID: 31150618 [PDF] [PubMed] Using deep learning to model the hierarchical structure and function of a cell.* Nat Methods. 2018 Mar 5. doi: 10.1038/nmeth.4627. PMID: 29505029 [PDF] [PubMed] [Cover Art] *Cover article Please subscribe to this channel: https://www.youtube.com/c/ScientificSense?sub_confirmation=1
--- Support this podcast: https://podcasters.spotify.com/pod/show/scientificsense/supportProf. Lenn Goodman, Professor of Philosophy at Vanderbilt University
Prof. Anne C Hart, Professor of Neuroscience at Brown University.
Prof. Ellen Armour, Carpenter Chair of Feminist Theology at Vanderbilt Divinity School
Prof. Emery Brown, Professor of Anesthesia at Harvard Medical School and Computational Neuroscience at MIT
Prof. Jason Haffner, Prof of Physics and Astronomy at Rice University.
Prof. Ghassan AlRegib, Professor in the School of Electrical and Computer Engineering at the Georgia Institute of Technology.
Prof. Jacquelyn Pless, Assistant Professor at the MIT Sloan School of Management.
Prof. Wael Asaad, Associate Professor of Neuroscience and NeuroSurgery at Brown University
Prof. Benjamin Moll, Professor of Economics at the London School of Economics
Prof. Andrew Newberg, Professor of Integrative Medicine and Nutritional Sciences at Thomas Jefferson University.
Prof. Murat Kantarcioglu, Professor of Computer Science at The University of Texas at Dallas
Prof. James Sauls, Professor of Physics at Northwestern University
Prof. Charles Lipson, Emeritus Professor of international relations at the University of Chicago
Prof. Marc Law, Professor of Economics at the University of Vermont
Prof. Cheryl Maslen, Professor of Medicine at Oregon Health & Science University
Sir Colin Blakemore, Professor of Neuroscience at City University of Hong Kong
Prof. Debby Silver, Associate Professor of Molecular Genetics and Microbiology at Duke University School of Medicine
Prof. John Pearson, Assistant Professor of Neurobiology at Duke University
Prof. Mitch Begelman, Professor of Astrophysical Sciences at the University of Colorado, Boulder
Prof. Adele Diamond, Professor of Cognitive Neuroscience at the University of British Columbia
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